http://repository.iitr.ac.in/handle/123456789/4154
Title: | Design and synthesis of de novo peptide for manganese binding |
Authors: | Singh U.P. Singh R.K. Isogai Y. Shiro Y. |
Published in: | International Journal of Peptide Research and Therapeutics |
Abstract: | The de novo peptide with 63-residues (MHB) has been synthesized biochemically and used for the binding of manganese (II) ions. In designed peptide, the leucine of the peptide dA1 (prototype) was replaced by His27 and Asp41 for binding the manganese (II) ions. The different chromatography studies and mass determination showed that new peptide folds into a monomeric, highly helical with a active site structure similar to the native Mn-SOD in an aqueous solution. Electron paramagnetic resonance (EPR) study suggested that the peptide binds single manganese (II) ion per molecule loosely with K D value of about 36 μM. The circular dichroism (CD) studies demonstrated that the helical contents of the peptide did not change significantly even after binding the metal ions. The SOD activity study of the Mn-peptide complex showed that the IC50 values is 8.08 μM. © 2006 Springer Science+Business Media, Inc. |
Citation: | International Journal of Peptide Research and Therapeutics (2006), 12(4): 379-385 |
URI: | https://doi.org/10.1007/s10989-006-9042-3 http://repository.iitr.ac.in/handle/123456789/4154 |
Issue Date: | 2006 |
Keywords: | CD De novo peptide Design EPR Manganese SOD activity |
ISSN: | 15733149 |
Author Scopus IDs: | 57203181883 35323403800 7006322413 7005845027 |
Author Affiliations: | Singh, U.P., Department of Chemistry, Indian Institute of Technology Roorkee, Roorkee 247 667, India Singh, R.K., Department of Chemistry, Indian Institute of Technology Roorkee, Roorkee 247 667, India Isogai, Y., Biometal Science Laboratory, RIKEN Harima Institute, Mikazuki, Sayo, Hyogo 679-5148, Japan Shiro, Y., Biometal Science Laboratory, RIKEN Harima Institute, Mikazuki, Sayo, Hyogo 679-5148, Japan |
Funding Details: | We thanks Ms. Yasue Ichikawa and Ms. Rie Nakazawa for DNA sequencing (Bioarchitect Research Group, RIKEN). Ms. Tomoe Nishimura for mass spectrometry measurements (Biomolecular Characterization Team, RIKEN). UPS is very grateful to JSPS, Japan for financial support to work in RIKEN. The helpful discussions with Prof. S. Sopory, International Center for Genetic Engineering and Biotechnology, New Delhi, India and Dr. S. Prasad, Dabur Research Foundation, Ghaziabad, India are highly acknowledged. |
Corresponding Author: | Singh, U.P.; Department of Chemistry, Indian Institute of Technology Roorkee, Roorkee 247 667, India; email: udaipfcy@iitr.ernet.in |
Appears in Collections: | Journal Publications [CY] |
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