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Please use this identifier to cite or link to this item: http://repository.iitr.ac.in/handle/123456789/4154
Title: Design and synthesis of de novo peptide for manganese binding
Authors: Singh U.P.
Singh R.K.
Isogai Y.
Shiro Y.
Published in: International Journal of Peptide Research and Therapeutics
Abstract: The de novo peptide with 63-residues (MHB) has been synthesized biochemically and used for the binding of manganese (II) ions. In designed peptide, the leucine of the peptide dA1 (prototype) was replaced by His27 and Asp41 for binding the manganese (II) ions. The different chromatography studies and mass determination showed that new peptide folds into a monomeric, highly helical with a active site structure similar to the native Mn-SOD in an aqueous solution. Electron paramagnetic resonance (EPR) study suggested that the peptide binds single manganese (II) ion per molecule loosely with K D value of about 36 μM. The circular dichroism (CD) studies demonstrated that the helical contents of the peptide did not change significantly even after binding the metal ions. The SOD activity study of the Mn-peptide complex showed that the IC50 values is 8.08 μM. © 2006 Springer Science+Business Media, Inc.
Citation: International Journal of Peptide Research and Therapeutics (2006), 12(4): 379-385
URI: https://doi.org/10.1007/s10989-006-9042-3
http://repository.iitr.ac.in/handle/123456789/4154
Issue Date: 2006
Keywords: CD
De novo peptide
Design
EPR
Manganese
SOD activity
ISSN: 15733149
Author Scopus IDs: 57203181883
35323403800
7006322413
7005845027
Author Affiliations: Singh, U.P., Department of Chemistry, Indian Institute of Technology Roorkee, Roorkee 247 667, India
Singh, R.K., Department of Chemistry, Indian Institute of Technology Roorkee, Roorkee 247 667, India
Isogai, Y., Biometal Science Laboratory, RIKEN Harima Institute, Mikazuki, Sayo, Hyogo 679-5148, Japan
Shiro, Y., Biometal Science Laboratory, RIKEN Harima Institute, Mikazuki, Sayo, Hyogo 679-5148, Japan
Funding Details: We thanks Ms. Yasue Ichikawa and Ms. Rie Nakazawa for DNA sequencing (Bioarchitect Research Group, RIKEN). Ms. Tomoe Nishimura for mass spectrometry measurements (Biomolecular Characterization Team, RIKEN). UPS is very grateful to JSPS, Japan for financial support to work in RIKEN. The helpful discussions with Prof. S. Sopory, International Center for Genetic Engineering and Biotechnology, New Delhi, India and Dr. S. Prasad, Dabur Research Foundation, Ghaziabad, India are highly acknowledged.
Corresponding Author: Singh, U.P.; Department of Chemistry, Indian Institute of Technology Roorkee, Roorkee 247 667, India; email: udaipfcy@iitr.ernet.in
Appears in Collections:Journal Publications [CY]

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